Last reviewed: 2 July 2026
Quick summary
- Self-employed GP locum income usually needs a clear Self Assessment record pack: session income, expenses, pension records and payment dates.
- The difficult parts are often mixed PAYE/locum work, chambers statements, mileage, indemnity, appraisal/CPD costs and pensionable income records.
- Before speaking to an accountant, prepare income by practice or chambers, expenses by category, and any NHS pension or superannuation documents.
Topic hub: GP and dentist accounting guides
Direct answer
GP locums should keep Self Assessment records that show gross sessional income, where the work was done, when payment was received, what costs were incurred and whether any work is pensionable. If you are partly PAYE and partly self-employed, do not assume PAYE tax covers the locum income. The locum income may need to be reported separately.
The best accountant conversation starts with a clean tax-year summary. A GP locum accountant needs to understand your work pattern: direct practice sessions, chambers work, out-of-hours work, salaried sessions, appraisal income, medical reports, pensionable work and non-pensionable private income.
The GP locum money model
A GP locum's income rarely arrives like a normal salary. You may invoice practices directly, receive statements through a locum chambers, work through an agency, do out-of-hours shifts, mix salaried and locum work, or have short periods between jobs. The bank account may show net amounts after chambers fees, or late payments that relate to earlier sessions.
That timing matters. Self Assessment follows tax years, and pension or superannuation records may need figures that match specific work. Mileage records also need care. A diary entry saying "clinic day" is weaker than a mileage log showing date, practice, postcode, purpose and miles. Professional costs need the same discipline: GMC, indemnity, appraisal, CPD, subscriptions, phone, laptop, medical bag and equipment should be recorded with receipts and business-use notes.
Competitor pages often list generic expenses, but GP locums need something more practical: a way to reconcile sessions, invoices, chambers statements, mileage and pension paperwork. That is where a good accountant should add value.
Examples where GP locums get stuck
- A locum does Monday sessions at one practice and ad hoc out-of-hours shifts. The income needs to be split by source and tax year.
- A chambers statement deducts fees before payout. The accountant may need gross session income and chambers costs, not only bank receipts.
- A salaried GP does weekend locum sessions. PAYE salary and self-employed income should be kept separate.
- A locum has pensionable and non-pensionable work. Pension records need to be checked against the current NHSBSA process.
- A doctor starts locuming after leaving a partnership. The opening position, overlap with old partnership income and pension records need care.
Records to gather before asking for help
- Session diary by practice, date, hours and fee.
- Invoices, chambers statements, agency statements and bank receipts.
- Pensionable and non-pensionable income notes.
- NHS pension, superannuation or locum forms you have received or submitted.
- Mileage log with date, destination, purpose and miles.
- GMC, indemnity, appraisal, CPD, DBS, courses and professional subscriptions.
- Phone, IT, software, medical bag, equipment and home-office records.
- PAYE P60 or payslips if you also have salaried work.
Common mistakes
The first mistake is using bank deposits as the only income record. If chambers fees or agency deductions are taken before payment, the accountant may need the gross income and fee separately. The second mistake is treating all medical income the same. Salaried GP income, self-employed locum sessions, private reports and out-of-hours work can have different records and reporting routes.
The third mistake is leaving mileage and pension records to memory. GP locums often work at multiple locations, so a contemporaneous log is much stronger than a year-end estimate. The fourth mistake is assuming every expense is automatically allowable because it is medical. The accountant still needs the business purpose and evidence.
When to speak to an accountant
Speak to an accountant if you have mixed PAYE and locum income, chambers fees, pensionable and non-pensionable work, high earnings, annual allowance concerns, old unreported locum income, or uncertainty over whether you are self-employed or employed for a specific engagement. Ask early if deadlines or NHS pension forms are involved.
A monthly workflow for GP locums
At month end, create a simple session summary before receipts and diary entries scatter. List each session date, practice, hours, fee, invoice number, payment date and whether the work is pensionable. Then add mileage for each journey and attach the supporting invoice, chambers statement or agency statement. If you work through a chambers, keep the statement even when the bank receipt looks simple, because the statement may show deductions that need to be treated separately.
Expenses should be added at the same time. GMC, indemnity, appraisal, CPD and subscriptions are easier to support when receipts are saved in the month they are paid. Equipment and IT costs should include a note of business use, especially where an item also has private use. A monthly workflow also helps if an accountant asks for figures before a pension or Self Assessment deadline.
What should be included in the accountant's scope?
Ask whether the fee includes bookkeeping cleanup, Self Assessment, payments-on-account estimates, pensionable-income record checks, PAYE pages, capital allowances on equipment, and review of old unreported income. A cheap tax-return-only service may be enough for a very tidy locum, but it may not be enough where pension records, chambers statements and mixed employment are involved.
Questions to ask a GP locum accountant
- How do you want me to split sessional income by practice, chambers and agency?
- Do you need gross chambers income as well as net bank deposits?
- Which expenses do you commonly see challenged for GP locums?
- What pension or superannuation records do you need from me?
- Can you handle PAYE and self-employed locum income in the same return?
- What should I update monthly so the tax return is not rebuilt from memory?
Related guides
Key takeaway
GP locum accounting is easiest when sessions, chambers statements, expenses, mileage and pension records are organised monthly. The accountant's job is much clearer when the income trail is already visible.
Official guidance checked on 2 July 2026
- NHSBSA: NHS Pensions
- GOV.UK: who must send a Self Assessment tax return
- GOV.UK: business records if self-employed
- GOV.UK: Check Employment Status for Tax
Exact NHS pension processes and locum forms can change. Check current NHSBSA guidance before relying on a form, deadline or pensionable-income treatment.
FAQs
Can PAYE and GP locum income go on one tax return?
Yes, a Self Assessment return can include PAYE income and self-employed income, but the records should be kept separate.
Are GP locum chambers fees expenses?
They may be relevant business costs, but the accountant needs the gross income and fee evidence to treat them correctly.
Do GP locums need pension advice?
Tax accountants may help with records and tax reporting, but specialist pension advice may be needed for annual allowance or scheme decisions.